BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029H06SP1|AL429127
(914 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1283 1008 0.0
>3x_Contig1283
Length = 6261
Score = 1008 bits (508), Expect = 0.0
Identities = 509/510 (99%)
Strand = Plus / Minus
Query: 1 gatcttagattcaccagggaaaatgggttgtcctaatagcagttcagccataacacaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gatcttagattcaccagggaaaatgggttgtcctaatagcagttcagccataacacaacc 451
Query: 61 tgcagaccaaatatcaatctttgttgtgtaattggtagcaccaaagatcaactctggggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tgcagaccaaatatcaatctttgttgtgtaattggtagcaccaaagatcaactctggggc 391
Query: 121 tctgtagtaacgggagcraatatatgacacattgggctcgtttggtttcaactgtttagc 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tctgtagtaacgggagcaaatatatgacacattgggctcgtttggtttcaactgtttagc 331
Query: 181 agaccccaaatcacagattttcaacagtaaagtatctggatccaccaaaatattctgtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agaccccaaatcacagattttcaacagtaaagtatctggatccaccaaaatattctgtgg 271
Query: 241 tttgatgtctctatggcagacattgaccacttgatgcaaatagtttaaagatttgaacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tttgatgtctctatggcagacattgaccacttgatgcaaatagtttaaagatttgaacaa 211
Query: 301 ttggaacatgtaaatcttgatttcgtaacgatccattggttgatgcaaggaaatgaactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ttggaacatgtaaatcttgatttcgtaacgatccattggttgatgcaaggaaatgaactc 151
Query: 361 tttgagccgttgataaagagacatgggcatgtaatctacaatcaaatttagataaagttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 tttgagccgttgataaagagacatgggcatgtaatctacaatcaaatttagataaagttc 91
Query: 421 ttggtccgattgttcaaggaaatagtacttcaaatcgatcaaattcggatgactgatcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 ttggtccgattgttcaaggaaatagtacttcaaatcgatcaaattcggatgactgatcaa 31
Query: 481 tttcatgatctccagttctctattcttaaa 510
||||||||||||||||||||||||||||||
Sbjct: 30 tttcatgatctccagttctctattcttaaa 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,577
Number of Sequences: 1807
Number of extensions: 12577
Number of successful extensions: 78
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)